Stem-loop sequence mdo-mir-138

AccessionMI0005300 (change log)
DescriptionMonodelphis domestica miR-138 stem-loop
Gene family MIPF0000075; mir-138
Stem-loop 
   - u   u  ag       u     uca     acaagcagcu 
5'  g ugc gc  cuggugu gugaa   ggccg          c
    | ||| ||  ||||||| |||||   |||||           
3'  c acg ug  gaccaca cacuu   ucggc          a
   a u   u  -g       u     -ua     ccauuauccu
Get sequence
Deep sequencing
32417 reads, 380 reads per million, 5 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MonDom5; GCF_000002295.2) Overlapping transcripts
chr1: 447811941-447812023 [+]
intergenic
Database links

Mature sequence mdo-miR-138

Accession MIMAT0004111
Sequence

9 -  

agcugguguugugaauc

 - 25

Get sequence
Deep sequencing31763 reads, 5 experiments
Evidence experimental; Microarray [1], PCR [1]
Database links
Predicted targets

References

1
PMID:17965199 "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica" Devor EJ, Samollow PB J Hered. 99:66-72(2008).