miRBase entry: 17965199

In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica

PubMed ID 17965199
Authors "Devor EJ, Samollow PB"
Journal "J Hered
Volume 99
Pages 66-72

There are 119 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
mdo-mir-1-1 MI0005269 98802 ref|NC_077229.2| 265400966 265401051 + High
mdo-mir-7-1 MI0005270 71 ref|NC_077232.2| 127728893 127728969 + High
mdo-mir-9a-2 MI0005271 25259 ref|NC_077229.2| 71302388 71302474 + High
mdo-mir-9a-1 MI0005272 25316 ref|NC_077227.1| 127221252 127221341 - High
mdo-mir-10a MI0005273 17651 ref|NC_077228.1| 200277411 200277500 - High
mdo-mir-10b MI0005274 8857 ref|NC_077230.1| 188092030 188092140 + High
mdo-mir-21 MI0005275 7751 ref|NC_077228.1| 179298248 179298321 - High
mdo-mir-22 MI0005276 1459 ref|NC_077228.1| 511016792 511016872 - High
mdo-mir-30a MI0005277 46590 ref|NC_077228.1| 321932380 321932451 - High
mdo-mir-31 MI0005278 164 ref|NC_077232.2| 38144972 38145058 - High
mdo-mir-32 MI0005279 26 ref|NC_077232.2| 139208195 139208263 - High
mdo-mir-34a MI0005280 65 ref|NC_077230.1| 401537236 401537346 + High
mdo-mir-100 MI0005281 10012 ref|NC_077230.1| 226522577 226522656 + High
mdo-mir-101-2 MI0005282 12997 ref|NC_077232.2| 165666575 165666653 + High
mdo-mir-101-1 MI0005283 12529 ref|NC_077228.1| 11992480 11992562 + High
mdo-mir-103-1 MI0005284 3052 ref|NC_077227.1| 373976176 373976251 - High
mdo-mir-103-2 MI0005285 3056 ref|NC_077227.1| 734755429 734755512 - High
mdo-mir-107 MI0005286 74 ref|NC_077227.1| 86428962 86429045 + -
mdo-mir-122 MI0005287 18 ref|NC_077229.2| 103093615 103093688 - High
mdo-mir-124a-1 MI0005288 3546 ref|NC_077227.1| 597233542 597233624 + High
mdo-mir-124a-2 MI0005289 3546 ref|NC_077229.2| 224281486 224281578 - High
mdo-mir-124a-3 MI0005290 3560 ref|NC_077227.1| 482618621 482618688 - High
mdo-mir-125b-1 MI0005291 2169 ref|NC_077230.1| 1274786 1274867 + High
mdo-mir-125b-2 MI0005292 2187 ref|NC_077230.1| 226572512 226572574 + High
mdo-mir-128a MI0005293 1810 ref|NC_077232.2| 292454275 292454358 - High
mdo-mir-129 MI0005294 3696 ref|NC_077234.2| 200312387 200312460 + High
mdo-mir-130a MI0005295 176 ref|NC_077231.2| 291301866 291301941 + High
mdo-mir-133a-1 MI0005296 275 ref|NC_077229.2| 265404632 265404718 + High
mdo-mir-135a MI0005297 88 ref|NC_077234.2| 81808962 81809061 + High
mdo-mir-135b MI0005298 15 ref|NC_077228.1| 110081329 110081428 - High
mdo-mir-137a MI0005299 1319 ref|NC_077228.1| 464057036 464057091 - -
mdo-mir-138-1 MI0005300 371 ref|NC_077227.1| 454853897 454853979 + High
mdo-mir-142 MI0005301 471 ref|NC_077228.1| 181206532 181206605 + High
mdo-mir-143 MI0005302 45260 ref|NC_077227.1| 384120852 384120914 - High
mdo-mir-144 MI0005303 741 ref|NC_077228.1| 507248980 507249064 - High
mdo-mir-451 MI0005304 1367 ref|NC_077228.1| 507248865 507248926 - High
mdo-mir-145 MI0005305 209 ref|NC_077227.1| 384117946 384118015 - High
mdo-mir-152 MI0005306 649 ref|NC_077228.1| 199489717 199489789 - High
mdo-mir-182 MI0005307 447 ref|NC_077234.2| 201899987 201900057 - High
mdo-mir-184 MI0005308 6428 ref|NC_077227.1| 125016674 125016757 - High
mdo-mir-187 MI0005309 366 ref|NC_077229.2| 136511258 136511338 + High
mdo-mir-181a-3 MI0005310 26516 ref|NC_077229.2| 443251559 443251630 + High
mdo-mir-186 MI0005311 371 ref|NC_077228.1| 6156525 6156592 + High
mdo-mir-193a MI0005312 59 ref|NC_077228.1| 504777028 504777093 - High
mdo-mir-196b MI0005313 1257 ref|NC_077234.2| 310143146 310143231 + -
mdo-mir-199b-1 MI0005314 779 ref|NC_077227.1| 461060120 461060208 - High
mdo-mir-203 MI0005315 36 ref|NC_077227.1| 317755013 317755093 - High
mdo-mir-204-1 MI0005316 50 ref|NC_077227.1| 147022069 147022165 - High
mdo-mir-206 MI0005317 1756 ref|NC_077228.1| 299686557 299686632 + -
mdo-mir-208a MI0005318 12 ref|NC_077227.1| 177466857 177466933 - -
mdo-mir-214 MI0005319 10 ref|NC_077228.1| 66979428 66979537 - High
mdo-mir-216a MI0005320 1 ref|NC_077227.1| 648061532 648061628 + -
mdo-mir-217 MI0005321 1 ref|NC_077227.1| 648075152 648075233 + -
mdo-mir-218-1 MI0005322 103 ref|NC_077231.2| 207092815 207092923 - High
mdo-mir-219a MI0005323 702 ref|NC_077227.1| 461199788 461199878 - High
mdo-mir-223 MI0005324 6 ref|NC_077235.2| 12616289 12616399 - Medium
mdo-mir-338 MI0005325 337 ref|NC_077228.1| 233016757 233016845 + High
mdo-mir-365 MI0005326 13 ref|NC_077232.2| 108671086 108671172 + High
mdo-mir-375 MI0005327 127 ref|NC_077233.2| 190400744 190400806 - -
mdo-mir-383 MI0005328 14 ref|NC_077231.2| 17467000 17467069 + High
mdo-mir-449a MI0005329 344 ref|NC_077229.2| 24293316 24293394 - High
mdo-let-7a-2 MI0005330 45193 ref|NC_077230.1| 226527976 226528048 + High
mdo-let-7g MI0005331 4532 ref|NC_077232.2| 206739490 206739572 - High
mdo-let-7i MI0005332 462 ref|NC_077234.2| 18563972 18564055 - High
mdo-mir-15a MI0005333 59 ref|NC_077230.1| 319027958 319028040 + High
mdo-mir-16-1 MI0005334 364 ref|NC_077230.1| 319028102 319028191 + High
mdo-mir-183 MI0005335 216 ref|NC_077234.2| 201907642 201907729 - High
mdo-mir-96 MI0005336 27 ref|NC_077234.2| 201907224 201907320 - High
mdo-mir-212 MI0005337 85 ref|NC_077228.1| 511421632 511421722 - High
mdo-mir-132 MI0005338 444 ref|NC_077228.1| 511420823 511420888 - High
mdo-mir-200c MI0005339 333 ref|NC_077234.2| 121160276 121160343 - High
mdo-mir-141 MI0005340 192 ref|NC_077234.2| 121159870 121159933 - High
mdo-mir-191 MI0005341 545 ref|NC_077232.2| 201233431 201233504 - High
mdo-mir-425 MI0005342 97 ref|NC_077232.2| 201231167 201231251 - High
mdo-mir-181a-1 MI0005343 26518 ref|NC_077228.1| 100300419 100300482 - High
mdo-mir-181b-1 MI0005344 2479 ref|NC_077228.1| 100300207 100300293 - High
mdo-mir-200b MI0005345 528 ref|NC_077230.1| 415665270 415665337 - High
mdo-mir-200a MI0005346 605 ref|NC_077230.1| 415662584 415662669 - High
mdo-mir-222a MI0005347 135 ref|NC_077230.1| 16373370 16373437 + -
mdo-mir-221 MI0005348 932 ref|NC_077230.1| 16373934 16374007 + High
mdo-let-7f-2 MI0005349 29228 ref|NC_077235.2| 89117134 89117213 - High
mdo-let-7a-3 MI0005350 45516 ref|NC_077234.2| 12787055 12787133 + High
mdo-let-7b MI0005351 34656 ref|NC_077234.2| 12788543 12788630 + High
mdo-mir-29b-1 MI0005352 929 ref|NC_077234.2| 202842202 202842287 - High
mdo-mir-29a-1 MI0005353 555 ref|NC_077234.2| 202841791 202841854 - High
mdo-mir-17 MI0005354 181 ref|NC_077233.2| 105836523 105836607 - High
mdo-mir-18a MI0005355 60 ref|NC_077233.2| 105836389 105836460 - High
mdo-mir-19a MI0005356 16 ref|NC_077233.2| 105836238 105836318 - High
mdo-mir-20a MI0005357 297 ref|NC_077233.2| 105836059 105836160 - High
mdo-mir-19b-1 MI0005358 78 ref|NC_077233.2| 105835934 105836022 - High
mdo-mir-92a-1 MI0005359 996 ref|NC_077233.2| 105835820 105835897 - High
mdo-let-7a-1 MI0005360 45337 ref|NC_077232.2| 227504825 227504916 + High
mdo-let-7f-1 MI0005361 27835 ref|NC_077232.2| 227505579 227505665 + High
mdo-let-7d MI0005362 1281 ref|NC_077232.2| 227510388 227510493 + High
mdo-mir-23a MI0005363 274 ref|NC_077229.2| 443187361 443187433 - High
mdo-mir-27a MI0005364 474 ref|NC_077229.2| 443187179 443187264 - High
mdo-mir-24-2 MI0005365 1320 ref|NC_077229.2| 443187043 443187115 - High
mdo-mir-23b MI0005366 725 ref|NC_077232.2| 19998470 19998543 + High
mdo-mir-27b MI0005367 2693 ref|NC_077232.2| 19998659 19998755 + High
mdo-mir-24-1 MI0005368 16 ref|NC_077232.2| 19999069 19999143 + High
mdo-mir-93 MI0005369 167 ref|NC_077228.1| 261536029 261536117 + High
mdo-mir-25 MI0005370 155 ref|NC_077228.1| 261536326 261536408 + High
mdo-mir-302b MI0005371 1 ref|NC_077231.2| 64157010 64157080 - -
mdo-mir-302c MI0005372 0 ref|NC_077231.2| 64156866 64156924 - -
mdo-mir-302a MI0005373 1 ref|NC_077231.2| 64156651 64156720 - -
mdo-mir-302d MI0005374 0 ref|NC_077231.2| 64156488 64156558 - -
mdo-mir-367 MI0005375 0 ref|NC_077231.2| 64156339 64156401 - -
mdo-mir-1540a MI0007263 None ref|NC_077227.1| 589491324 589491400 - -
mdo-mir-1541 MI0007264 24443 ref|NC_077230.1| 437547398 437547465 + -
mdo-mir-1542-1 MI0007265 1742 ref|NC_077234.2| 95799664 95799735 - High
mdo-mir-1542-2 MI0007266 1716 ref|NC_077234.2| 95799860 95799939 - High
mdo-mir-1543 MI0007267 40 ref|NC_077227.1| 337329441 337329514 + High
mdo-mir-340 MI0007268 456 ref|NC_077227.1| 77112701 77112801 + High
mdo-mir-1544a MI0007269 644 ref|NC_077235.2| 13877788 13877869 - High
mdo-mir-1545a MI0007270 49 ref|NC_077235.2| 13876207 13876278 - High
mdo-mir-1546 MI0007271 2177 ref|NC_077229.2| 516435496 516435584 - High
mdo-mir-1547 MI0007272 2966 ref|NC_077230.1| 339210605 339210695 - High
mdo-mir-1548 MI0007273 246 ref|NC_077228.1| 528417913 528417972 + High
mdo-mir-1549 MI0007274 560 ref|NC_077234.2| 121208750 121208812 - High



Comments or questions? Email mirbase@manchester.ac.uk