miRBase entry: mdo-mir-451

Stem-loop mdo-mir-451


Accession
MI0005304
Description
Monodelphis domestica mdo-mir-451 precursor miRNA


Sequence

99741 reads, 1605.0 reads per million, 5 experiments
cuggcggggAAACCGUUACCAUUACUGUGUUuaguaaugguaaggguucucccgcugcgcug
..(((((((.((((.((((((((((((....)))))))))))).)))).)))))))......

Structure
----cu       A    G            U 
      ggcgggg AACC UUACCAUUACUG G
      ||||||| |||| ||||||||||||  
      ucgcccu uugg aaugguaaugau U
gucgcg       c    g            U 


Annotation confidence High
Do you think this miRNA is real?

Genome context
ref|NC_077228.1|: 507248865-507248926 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-451
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-451-5p

Accession MIMAT0004115
Description Monodelphis domestica mdo-miR-451-5p mature miRNA
Sequence 10 - AAACCGUUACCAUUACUGUGUU - 31
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 17965199
    In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
    "Devor EJ, Samollow PB"
    "J Hered (2008) 99:66-72