Accession
MI0005346
Description
Monodelphis domestica
mdo-mir-200a precursor miRNA
Gene family
MIPF0000019;
mir-8
Sequence
30098
reads,
605
reads per million, 5 experiments
gggccucugugggCAUCUUACUAGACAGUGCUGGAuuuuuggauguacucUAACACUGUCUGGUAACGAUGUuuaaagagggaacc
...(((((.(((((((((((((((((((((.((((.............)))).))))))))))))).)))))))).))))).....
...(((((.(((((((((((((((((((((.((((.............)))).))))))))))))).)))))))).))))).....
Structure
--ggg g - C uuuuu
ccucu ugggCAUC UUACUAGACAGUG UGGA g
||||| |||||||| ||||||||||||| |||| g
ggaga auuUGUAG AAUGGUCUGUCAC AUcu a
ccaag a C A caugu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr4: 389169611-389169696 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mdo-mir-200a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mdo-miR-200a-5p
| Accession | MIMAT0004157 |
| Description | Monodelphis domestica mdo-miR-200a-5p mature miRNA |
| Sequence | 14 - CAUCUUACUAGACAGUGCUGGA - 35 |
| Evidence | not_experimental |
Mature mdo-miR-200a-3p
| Accession | MIMAT0004158 |
| Description | Monodelphis domestica mdo-miR-200a-3p mature miRNA |
| Sequence | 51 - UAACACUGUCUGGUAACGAUGU - 72 |
| Evidence | not_experimental |
| Database links |
|
| Predicted targets |
|
References
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