miRBase entry: mdo-mir-206

Stem-loop mdo-mir-206


Accession
MI0005317
Description
Monodelphis domestica mdo-mir-206 precursor miRNA


Sequence

103236 reads, 1940.0 reads per million, 5 experiments
gaggcaacaugcuucuuuauauccccauaugaauuaugcugcuaUGGAAUGUAAGGAAGUGUGUGGuuucgggaag
(((((.((((((((((((((((..(((((.............))))).)))))))))))))))).)))))......

Structure
------     a                cc     ugaau 
      gaggc acaugcuucuuuauau  ccaua     u
      ||||| ||||||||||||||||  |||||     a
      cuuuG UGUGUGAAGGAAUGUA  GGUau     u
gaaggg     G                -A     cgucg 


Annotation confidence Not enough data
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Genome context
ref|NC_077228.1|: 299686557-299686632 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-206
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-206-3p

Accession MIMAT0004128
Description Monodelphis domestica mdo-miR-206-3p mature miRNA
Sequence 45 - UGGAAUGUAAGGAAGUGUGUGG - 66
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 17965199
    In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
    "Devor EJ, Samollow PB"
    "J Hered (2008) 99:66-72