Stem-loop mdo-mir-186

Accession

MI0005311

Description

Monodelphis domestica mdo-mir-186 precursor miRNA

Sequence

16889 reads, 366 reads per million, 5 experiments

accuucCAAAGAAUUCUCCUUUUGGGCUUuugauucuuaauuucagCCCAAAGGUGAAUUUUUUGGGa
...(((((((((((((.(((((.(((((...((((...))))..)))))))))).)))))))))))))

Structure

acc             U     U     Uuu    c 
   uucCAAAGAAUUC CCUUU GGGCU   gauu  
   ||||||||||||| ||||| |||||   |||| u
   aGGGUUUUUUAAG GGAAA CCCga   uuaa  
---             U     -     -cu    u 

Annotation confidence High

Genome context

chr2: 20448567-20448634 [+]

Mature mdo-miR-186-5p

• Accession: MIMAT0004122
• Description: Monodelphis domestica mdo-miR-186-5p mature miRNA
• Sequence: 7 - CAAAGAAUUCUCCUUUUGGGCUU - 29
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-186-3p

• Accession: MIMAT0026676
• Description: Monodelphis domestica mdo-miR-186-3p mature miRNA
• Sequence: 47 - CCCAAAGGUGAAUUUUUUGGG - 67
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45