Stem-loop mdo-mir-203

Accession

MI0005315

Description

Monodelphis domestica mdo-mir-203 precursor miRNA

Sequence

1446 reads, 29.0 reads per million, 5 experiments

agcugcccugguccAGUGGUUCUUAACAGUUCAACAguucuguguagagauugUGAAAUGUUUAGGACCACUUGAucuggg
.....(((.((((.(((((((((.((((.((((.((((.((......)))))))))).)))).))))))))).)))).)))

Structure

agcug   u    c         U    G    A    u  gu 
     ccc gguc AGUGGUUCU AACA UUCA CAgu cu  g
     ||| |||| ||||||||| |||| |||| |||| ||   
     ggg cuAG UCACCAGGA UUGU AAGU guua ga  u
-----   u    U         U    A    -    -  ga 

Annotation confidence High

Genome context

ref|NC_077227.1|: 317755013-317755093 [-]

Mature mdo-miR-203-5p

• Accession: MIMAT0061145
• Description: Monodelphis domestica mdo-miR-203-5p mature miRNA
• Sequence: 15 - AGUGGUUCUUAACAGUUCAACA - 36
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-203-3p

• Accession: MIMAT0004126
• Description: Monodelphis domestica mdo-miR-203-3p mature miRNA
• Sequence: 54 - UGAAAUGUUUAGGACCACUUGA - 75
• Evidence: not_experimental

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72