Stem-loop mdo-mir-375

Accession

MI0005327

Description

Monodelphis domestica mdo-mir-375 precursor miRNA

Sequence

2874 reads, 113 reads per million, 5 experiments

cccgcgccgagccccucgcacaaaccggaccugagcgUUUUGUUCGUUCGGCUCGCGUGAggc
(((((((.(((((...((.(((((.((........)).))))).))...)))))))))).)).

Structure

-  -     c     ccu  c     c  gac 
 cc cgcgc gagcc   cg acaaa cg   c
 || ||||| |||||   || ||||| ||    
 gg GUGCG CUCGG   GC UGUUU gc   u
c  A     -     CUU  U     U  gag 

Annotation confidence Not enough data

Genome context

chr7: 173725890-173725952 [+]

Mature mdo-miR-375

• Accession: MIMAT0004138
• Description: Monodelphis domestica mdo-miR-375 mature miRNA
• Sequence: 38 - UUUUGUUCGUUCGGCUCGCGUGA - 60
• Evidence: not_experimental

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72