Stem-loop mdo-mir-1543

Accession

MI0007267

Description

Monodelphis domestica mdo-mir-1543 precursor miRNA

Sequence

733 reads, 40 reads per million, 3 experiments

gauagugcuuugcaccacugagaguggauuaacuuccuuuaugaagUUAGUCCUAGUCUAGGUGCACAcauguc
(((((((...((((((....(((.((((((((((((......))))))))))).).))).))))))))).))))

Structure

    -   cuu      acug   g -           cu 
gaua gug   ugcacc    aga u ggauuaacuuc  u
|||| |||   ||||||    ||| | |||||||||||   
cugu cAC   ACGUGG    UCU A CCUGAUUgaag  u
    a   ---      ---A   G U           ua 

Annotation confidence Not enough data

Comments

This sequence is referred to by the unofficial identifier Mdo-174 in [1].

Genome context

chr1: 330615489-330615562 [+]

Mature mdo-miR-1543

• Accession: MIMAT0006142
• Description: Monodelphis domestica mdo-miR-1543 mature miRNA
• Sequence: 47 - UUAGUCCUAGUCUAGGUGCACA - 68
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72