Stem-loop mdo-mir-7-1

Accession

MI0005270

Description

Monodelphis domestica mdo-mir-7-1 precursor miRNA

Literature search

1 open access papers mention mdo-mir-7-1
(2 sentences)

Sequence

3860 reads, 111.0 reads per million, 5 experiments

uuggccuaguucugugUGGAAGACUAGUGAUUUUGUUGUUuuuagauaacuaaaacgaCAACAAAUCACAGUCUGCC
.................((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).))

Structure

uuggccuaguucugugU  A     A       U      --     a 
                 GG AGACU GUGAUUU GUUGUU  uuuag u
                 || ||||| ||||||| ||||||  |||||  
                 CC UCUGA CACUAAA CAACag  aaauc a
-----------------  G     -       -      ca     a 

Annotation confidence High

Genome context

ref|NC_077232.2|: 127728893-127728969 [+]

Mature mdo-miR-7-5p

• Accession: MIMAT0004086
• Description: Monodelphis domestica mdo-miR-7-5p mature miRNA
• Sequence: 17 - UGGAAGACUAGUGAUUUUGUUGUU - 40
• Evidence: not_experimental

Mature mdo-miR-7-3p

• Accession: MIMAT0051596
• Description: Monodelphis domestica mdo-miR-7-3p mature miRNA
• Sequence: 59 - CAACAAAUCACAGUCUGCC - 77
• Evidence: not_experimental

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72