Stem-loop mdo-mir-103-1

Accession

MI0005284

Description

Monodelphis domestica mdo-mir-103-1 precursor miRNA

Sequence

178223 reads, 3052 reads per million, 5 experiments

uugucuUCGGCUUCUUUACAGUGCUGCCUUGuugcauauggaucaAGCAGCAUUGUACAGGGCUAUGAagacauug
.(((((((((((.((.(((((((((((.(((.(.(....).).)))))))))))))).))))))..)))))))...

Structure

--u       --    U  U           C   u g a 
   ugucuUC  GGCU CU UACAGUGCUGC UUG u c u
   |||||||  |||| || ||||||||||| ||| | |  
   acagaAG  UCGG GA AUGUUACGACG Aac a g a
guu       UA    -  C           -   u g u 

Annotation confidence High

Genome context

chr1: 367063025-367063100 [-]

Mature mdo-miR-103-3p

• Accession: MIMAT0004099
• Description: Monodelphis domestica mdo-miR-103-3p mature miRNA
• Sequence: 46 - AGCAGCAUUGUACAGGGCUAUGA - 68
• Evidence: experimental ; Microarray [1], PCR [1], Illumina [2]

Mature mdo-miR-103-1-5p

• Accession: MIMAT0026658
• Description: Monodelphis domestica mdo-miR-103-1-5p mature miRNA
• Sequence: 7 - UCGGCUUCUUUACAGUGCUGCCUUG - 31
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45