Stem-loop mdo-mir-103-2

Accession

MI0005285

Description

Monodelphis domestica mdo-mir-103-2 precursor miRNA

Sequence

178300 reads, 3050 reads per million, 5 experiments

cuuggugcuuucAGCUUCUUUACAGUGCUGCCUUGuugcauugaugucaAGCAGCAUUGUACAGGGCUAUGAaagaaccaagau
((((((.(((((((((.((.(((((((((((.(((..(((....))))))))))))))))).)))))..)))))).))))))..

Structure

--      g      --   U  U           C   uu   u 
  cuuggu cuuucA  GCU CU UACAGUGCUGC UUG  gca u
  |||||| ||||||  ||| || ||||||||||| |||  |||  
  gaacca gaaAGU  CGG GA AUGUUACGACG Aac  ugu g
ua      a      AU   -  C           -   --   a 

Annotation confidence Medium

Genome context

chr1: 727148312-727148395 [-]

Mature mdo-miR-103-3p

• Accession: MIMAT0004099
• Description: Monodelphis domestica mdo-miR-103-3p mature miRNA
• Sequence: 50 - AGCAGCAUUGUACAGGGCUAUGA - 72
• Evidence: experimental ; Microarray [1], PCR [1], Illumina [2]

Mature mdo-miR-103-2-5p

• Accession: MIMAT0031097
• Description: Monodelphis domestica mdo-miR-103-2-5p mature miRNA
• Sequence: 13 - AGCUUCUUUACAGUGCUGCCUUG - 35
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45