Stem-loop mdo-let-7a-3

Accession

MI0005350

Description

Monodelphis domestica mdo-let-7a-3 precursor miRNA

Sequence

2822875 reads, 55583.0 reads per million, 5 experiments

ggggUGAGGUAGUAGGUUGUAUAGUUugggggucgcucccucugucugugagauaaCUAUACAGUCUACUGUCUUUCCc
.(((.((((((((((((((((((((..(((((.....)))))(((((...))))))))))))))))))))))))).)))

Structure

g   U                    -----------Uu     u 
 ggg GAGGUAGUAGGUUGUAUAGU             ggggg c
 ||| ||||||||||||||||||||             ||||| g
 cCC UUCUGUCAUCUGACAUAUCa             cuccc c
-   U                    auagagugucugu     u 

Annotation confidence High

Genome context

ref|NC_077234.2|: 12787055-12787133 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-let-7a-3

Mature mdo-let-7a-5p

• Accession: MIMAT0004141
• Description: Monodelphis domestica mdo-let-7a-5p mature miRNA
• Sequence: 5 - UGAGGUAGUAGGUUGUAUAGUU - 26
• Evidence: experimental ; Microarray [1], PCR [1]

Mature mdo-let-7a-3-3p

• Accession: MIMAT0061141
• Description: Monodelphis domestica mdo-let-7a-3-3p mature miRNA
• Sequence: 57 - CUAUACAGUCUACUGUCUUUCC - 78
• Evidence: experimental ; Microarray [1], PCR [1]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72