Stem-loop mdo-mir-184

Accession

MI0005308

Description

Monodelphis domestica mdo-mir-184 precursor miRNA

Sequence

398756 reads, 6403 reads per million, 5 experiments

ccagucacauccCCUUAUCACUUUUCCAGCCCAGCuuucuaaugcuaauuguUGGACGGAGAACUGAUAAGGGUaggugauuga
.(((((((...(((((((((.((((((.(.(((((...............))))).))))))).)))))))))...))))))).

Structure

c       auc         C      A C     uuucua 
 cagucac   cCCUUAUCA UUUUCC G CCAGC      a
 |||||||   ||||||||| |||||| | |||||      u
 guuagug   GGGAAUAGU AAGAGG C GGUug      g
a       gaU         C      - A     uuaauc 

Annotation confidence Medium

Genome context

chr1: 120539101-120539184 [-]

Mature mdo-miR-184-3p

• Accession: MIMAT0004119
• Description: Monodelphis domestica mdo-miR-184-3p mature miRNA
• Sequence: 53 - UGGACGGAGAACUGAUAAGGGU - 74
• Evidence: experimental ; Microarray [1], PCR [1], Illumina [2]

Mature mdo-miR-184-5p

• Accession: MIMAT0026673
• Description: Monodelphis domestica mdo-miR-184-5p mature miRNA
• Sequence: 13 - CCUUAUCACUUUUCCAGCCCAGC - 35
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45