Stem-loop mdo-mir-196b

Accession

MI0005313

Description

Monodelphis domestica mdo-mir-196b precursor miRNA

Sequence

99315 reads, 1717.0 reads per million, 5 experiments

aacuggucugugauuUAGGUAGUUUCCUGUUGUUGGGgcuccaccuuucucucgacagcacgauacugccuucauuacuucaguug
((((((...(((((..(((((((.((.(((((((((((...........))))))))))).)).)))))))..))))).)))))).

Structure

-      ucu     uU       U  C           cucc 
 aacugg   gugau  AGGUAGU UC UGUUGUUGGGg    a
 ||||||   |||||  ||||||| || |||||||||||    c
 uugacu   cauua  uccguca ag acgacagcucu    c
g      --u     cu       u  c           cuuu 

Annotation confidence Not enough data

Genome context

ref|NC_077234.2|: 310143146-310143231 [+]

Mature mdo-miR-196b-5p

• Accession: MIMAT0004124
• Description: Monodelphis domestica mdo-miR-196b-5p mature miRNA
• Sequence: 16 - UAGGUAGUUUCCUGUUGUUGGG - 37
• Evidence: not_experimental

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72