Stem-loop mdo-mir-196b

Accession

MI0005313

Description

Monodelphis domestica mdo-mir-196b precursor miRNA

Gene family

MIPF0000031; mir-196

Sequence

61874 reads, 1257 reads per million, 5 experiments

aacuggucugugauuUAGGUAGUUUCCUGUUGUUGGggcuccaccuuucucucgacagcacgauacugccuucauuacuucaguug
((((((...(((((..(((((((.((.(((((((((((...........))))))))))).)).)))))))..))))).)))))).

Structure

-      ucu     uU       U  C           cucc 
 aacugg   gugau  AGGUAGU UC UGUUGUUGGgg    a
 ||||||   |||||  ||||||| || |||||||||||    c
 uugacu   cauua  uccguca ag acgacagcucu    c
g      --u     cu       u  c           cuuu 

Annotation confidence Not enough data

Genome context

chr8: 297346795-297346880 [+]

Mature mdo-miR-196b

• Accession: MIMAT0004124
• Description: Monodelphis domestica mdo-miR-196b mature miRNA
• Sequence: 16 - UAGGUAGUUUCCUGUUGUUGG - 36
• Evidence: not_experimental

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72