Stem-loop mdo-let-7f-2

Accession

MI0005349

Description

Monodelphis domestica mdo-let-7f-2 precursor miRNA

Sequence

1838621 reads, 29222 reads per million, 5 experiments

gggaUGAGGUAGUAGAUUGUAUAGUUuuagggucacacccgaucucggagauaaCUAUACAGUCUACUGUCUUUCCcacg
((((.(((((((((((((((((((((((.(((((......)))))..))...)))))))))))))))))))))))))...

Structure

---    U                     ---  -a     ac 
   ggga GAGGUAGUAGAUUGUAUAGUU   uu  ggguc  a
   |||| |||||||||||||||||||||   ||  |||||   
   cCCU UUCUGUCAUCUGACAUAUCaa   ag  ucuag  c
gca    -                     uag  gc     cc 

Annotation confidence Medium

Genome context

NW_001583589.1: 35394-35473 [-]

Mature mdo-let-7f-5p

• Accession: MIMAT0004161
• Description: Monodelphis domestica mdo-let-7f-5p mature miRNA
• Sequence: 5 - UGAGGUAGUAGAUUGUAUAGUU - 26
• Evidence: experimental ; PCR [1], Illumina [2]

Mature mdo-let-7f-2-3p

• Accession: MIMAT0031040
• Description: Monodelphis domestica mdo-let-7f-2-3p mature miRNA
• Sequence: 55 - CUAUACAGUCUACUGUCUUUCC - 76
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45