Stem-loop mdo-mir-222a

Accession

MI0005347

Description

Monodelphis domestica mdo-mir-222a precursor miRNA

Sequence

8100 reads, 127 reads per million, 5 experiments

uguagauacugucucuuuccaucagcAGCUACAUCUGGCUACUGGGUCUCugauggcaucuuagagcu
........(((...........)))...........((((.(((((..((....))...)))))))))

Structure

uguagauacugucucuuuccaucagcAGCUACAUCU    A     -UC  u 
                                    GGCU CUGGG   UC g
                                    |||| |||||   ||  
                                    ucga gauuc   gg a
------------------------------------    -     uac  u 

Annotation confidence Not enough data

Genome context

chr4: 17426716-17426783 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-222a

Mature mdo-miR-222a

• Accession: MIMAT0004159
• Description: Monodelphis domestica mdo-miR-222a mature miRNA
• Sequence: 27 - AGCUACAUCUGGCUACUGGGUCUC - 50
• Evidence: experimental ; Microarray [1], PCR [1]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72