miRBase entry: cbr-mir-786

Stem-loop cbr-mir-786

Accession

MI0005419

Description

Caenorhabditis briggsae cbr-mir-786 precursor miRNA

Gene family

MIPF0000363; mir-786

Sequence

gggacccuucccaacaaaaucucaaauaguggcauuuacacaagcaaugguaugUAAUGCCCUGUACGAGAUUUGGUuggugagaagucuc
(((((..((((((((.(((((((..((((.((((((...(((.((....)).)))))))))))))..))))))).))))).)))..)))))

Structure

     cc   -     a       aa    u      uac   a  a 
gggac  uuc ccaac aaaucuc  auag ggcauu   aca gc a
|||||  ||| ||||| |||||||  |||| ||||||   ||| ||  
cucug  gag gguUG UUUAGAG  UGUC CCGUAA   Ugu ug u
     aa   u     G       CA    -      ---   a  g

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chrX: 13610815-13610905 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbr-mir-786

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbr-miR-786

Accession	MIMAT0004287
Description	Caenorhabditis briggsae cbr-miR-786 mature miRNA
Sequence	55 - UAAUGCCCUGUACGAGAUUUGGU - 77
Evidence	not_experimental

References

PubMed ID: 17174894
Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
"Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
"Cell (2006) 127:1193-1207