miRBase entry: bta-mir-34a

Stem-loop bta-mir-34a


Accession
MI0005464
Description
Bos taurus bta-mir-34a precursor miRNA
Gene family
MIPF0000039; mir-34

Literature search
20 open access papers mention bta-mir-34a
(85 sentences)

Sequence

1254 reads, 45 reads per million, 70 experiments
ggccagcugugaguguuucuuUGGCAGUGUCUUAGCUGGUUGUugugaguaauaaugcaggaagcaaucagcaaguauacugcccuagaagugcugcacguuguggg
..(((..(((((((((((((..(((((((((((.((((((((((....(((....)))....))))))))))))).))))))))..))))))))).))))...))).

Structure
gg   -gc    -         uU        -   A          guga   a 
  cca   ugug aguguuucu  GGCAGUGU CUU GCUGGUUGUu    gua u
  |||   |||| |||||||||  |||||||| ||| ||||||||||    |||  
  ggu   gcac ucgugaaga  ccgucaua gaa cgacuaacga    cgu a
-g   guu    g         uc        u   -          agga   a 


Annotation confidence Not enough data
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Genome context
chr16: 45359550-45359656 [+]

Database links

Mature bta-miR-34a

Accession MIMAT0004340
Description Bos taurus bta-miR-34a mature miRNA
Sequence 22 - UGGCAGUGUCUUAGCUGGUUGU - 43
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988