miRBase entry: hsa-mir-940

Stem-loop hsa-mir-940


Accession
MI0005762
Symbol
HGNC: MIR940
Description
Homo sapiens hsa-mir-940 precursor miRNA
Gene family
MIPF0000540; mir-940

Literature search
36 open access papers mention hsa-mir-940
(333 sentences)

Sequence

3260 reads, 104 reads per million, 81 experiments
gugaggugugggcccggccccaggagcggggccugggcagccccguguguugaggaaggAAGGCAGGGCCCCCGCUCCCCgggccugaccccac
(((.(((..((((((((.....((((((((((((.(.(..((((.........))..))..).).))).))))))))))))))))).))).)))

Structure
   a   gu        cccca         -   g g ag  --  gug 
gug ggu  gggcccgg     ggagcgggg ccu g c  cc  cc   u
||| |||  ||||||||     ||||||||| ||| | |  ||  ||   g
cac cca  uccgggCC     CCUCGCCCC GGG C G  gg  gg   u
   c   -g        -----         C   A G AA  aa  agu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr16: 2271747-2271840 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from hsa-mir-940
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-940 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-940

Accession MIMAT0004983
Description Homo sapiens hsa-miR-940 mature miRNA
Sequence 60 - AAGGCAGGGCCCCCGCUCCCC - 80
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 17616659
    Patterns of known and novel small RNAs in human cervical cancer
    "Lui WO, Pourmand N, Patterson BK, Fire A"
    "Cancer Res (2007) 67:6031-6043