Stem-loop sequence tae-MIR167a

Accession

MI0006174 (change log)

Previous IDs

tae-MIR167

Description

Triticum aestivum miR167 stem-loop

Gene family

MIPF0000023; MIR167_1

Literature search

28 open access papers mention tae-MIR167a
(136 sentences)

Stem-loop

   ----------c       ----     c      a      a   ------------     uagc 
5'            ugcccaa    gggaa gaguga gcugcc gca            ugauc    u
              |||||||    ||||| |||||| |||||| |||            |||||    c
3'            acggguu    cccuu uucacu cgacgg cgu            acuag    c
   ucuucaucaac       gccg     c      c      -   cgcaaagaacaa     ugag 

Deep sequencing

1289923 reads, 6.13e+03 reads per million, 116 experiments

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0006174

Mature sequence tae-miR167a

• Accession: MIMAT0005347
• Previous IDs: tae-miR167
• Sequence: 18 - ugaagcugccagcaugaucua - 38
• Deep sequencing: 1289896 reads, 116 experiments
• Evidence: experimental; cloned [1]

References

1. PMID:17543110 "Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)" Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q Genome Biol. 8:R96(2007).