miRBase entry: tae-MIR1120a

Stem-loop tae-MIR1120a


Accession
MI0006182
Description
Triticum aestivum tae-MIR1120a precursor miRNA
Gene family
MIPF0000443; MIR1120

Literature search
12 open access papers mention tae-MIR1120a
(45 sentences)

Sequence

26473 reads, 137 reads per million, 116 experiments
gcggccgcccgggcagguacucccuccgucccauaauauaagaacauuuuugacaguguagugucaaaaACAUUCUUAUAUUAUGAGACGGAGggaguauuucccagcuccugaaucac
.(((..((..(((.((((((((((((((((.(((((((((((((..(((((((((......)))))))))..))))))))))))).))))))))))))))))))).))..)))......

Structure
-----g   cc  cc   c                c             ca         gu 
      cgg  gc  ggg agguacucccuccguc cauaauauaagaa  uuuuugaca  g
      |||  ||  ||| |||||||||||||||| |||||||||||||  |||||||||   
      guc  cg  ccc uuuaugaggGAGGCAG GUAUUAUAUUCUU  Aaaaacugu  u
cacuaa   cu  -a   -                A             AC         ga 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Yao et al. misname this sequence miR504 in [1]. miR1120 is unrelated to mammalian miR-504;

Genome context
Unknown

Database links

Mature tae-miR1120a

Accession MIMAT0005355
Description Triticum aestivum tae-miR1120a mature miRNA
Sequence 70 - ACAUUCUUAUAUUAUGAGACGGAG - 93
Evidence experimental
cloned [1], RTPCR [1]

References

  1. PubMed ID: 17543110
    Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
    Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
    Genome Biol (2007) 8:R96