Stem-loop sequence tae-MIR1121

Accession

MI0006183 (change log)

Description

Triticum aestivum miR1121 stem-loop

Gene family

MIPF0000443; MIR1120

Literature search

5 open access papers mention tae-MIR1121
(6 sentences)

Stem-loop

   ua    u                       u                 u 
5'   uaua guacucccucuguaaagaaauau agaguguuuagaucacu a
     |||| ||||||||||||||||||||||| ||||||||||||||||| a
3'   augu caugagggaggcauuucuuuaua ucucgcaaaucuaguga g
   --    -                       u                 u 

Deep sequencing

9630 reads, 0 reads per million, 116 experiments

Confidence

Annotation confidence: low

Feedback: Do you believe this miRNA is real?

Comments

Yao et al. misname this sequence miR505 in [1]. miR1121 is unrelated to mammalian miR-505;

Database links

• miRBase Tracker:MI0006183

Mature sequence tae-miR1121

• Accession: MIMAT0005356
• Sequence: 51 - aguagugaucuaaacgcucuua - 72
• Deep sequencing: 783 reads, 115 experiments
• Evidence: experimental; cloned [1], RTPCR [1]

References

1. PMID:17543110 "Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)" Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q Genome Biol. 8:R96(2007).