Stem-loop sequence tae-MIR1124

Accession

MI0006186 (change log)

Description

Triticum aestivum miR1124 stem-loop

Literature search

1 open access papers mention tae-MIR1124
(2 sentences)

Stem-loop

   au   a   c  aaaggaa     c   ga     auc  uc    a   cgccacgccauugucg 
5'   uac uga uc       cggcc ugg  gcucg   cu  ucac ucc                c
     ||| ||| ||       ||||| |||  |||||   ||  |||| |||                g
3'   aug gcu ag       gccgg acc  ugagc   ga  agug agg                u
   uc   -   c  aucgaag     a   --     ---  ga    c   acgcagcaccccuacc 

Deep sequencing

78 reads, 0 reads per million, 69 experiments

Confidence

Annotation confidence: not enough data

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Comments

Yao et al. misname this sequence miR508 in [1]. miR1124 is unrelated to mammalian miR-508;

Database links

• miRBase Tracker:MI0006186

Mature sequence tae-miR1124

• Accession: MIMAT0005359
• Sequence: 83 - gcaggacgugaagagcgagucc - 104
• Deep sequencing: 3 reads, 3 experiments
• Evidence: experimental; cloned [1], RTPCR [1]

References

1. PMID:17543110 "Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)" Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q Genome Biol. 8:R96(2007).