miRBase entry: tae-MIR1134

Stem-loop tae-MIR1134


Accession
MI0006196
Description
Triticum aestivum tae-MIR1134 precursor miRNA


Sequence

700 reads, 45 reads per million, 115 experiments
ccacgcguccggcauucuucuucuucuuguuguuguuguuguaauggauuuggaggaggaggaggaggaggagcugcuguugaugcuccuaguacaacaaauaaggaggcggcggaggaggagCAACAACAACAAGAAGAAGAAGAUuugggcuugaagcugcagcugcaacaacaugua
......((((((...((((((((((((((((((((((((((((........((((.(..((.((.((......)).)).))..).))))...))))))).........((..(......)..)).))))))))))))))))))))).))))))(((.(((....))).))).........

Structure
---------------------ccacgc      cau                     uguuguaauggauuuggaggaggaggaggaggaggagcugcuguugaugcuccuaguacaacaaauaaggag  gg gg 
                           guccgg   ucuucuucuucuuguuguugu                                                                        gc  c  a
                           ||||||   |||||||||||||||||||||                                                                        ||  |   
                           cggguu   AGAAGAAGAAGAACAACAACA                                                                        Cg  g  g
auguacaacaacgucgacgucgaaguu      --U                     -----------------------------------------------------------------------A  ag ag 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Yao et al. misname this sequence miR518 in [1]. miR1134 is unrelated to mammalian miR-518;

Genome context
Unknown

Database links

Mature tae-miR1134

Accession MIMAT0005369
Description Triticum aestivum tae-miR1134 mature miRNA
Sequence 124 - CAACAACAACAAGAAGAAGAAGAU - 147
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17543110
    Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
    Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
    Genome Biol (2007) 8:R96