miRBase entry: tae-MIR1136

Stem-loop tae-MIR1136


Accession
MI0006198
Description
Triticum aestivum tae-MIR1136 precursor miRNA
Gene family
MIPF0000382; MIR1122

Literature search
11 open access papers mention tae-MIR1136
(17 sentences)

Sequence

57640 reads, 447 reads per million, 116 experiments
uacucccuccguuccgaauuacUUGUCGCAGGUAUGGAUGUAUCUAgauguauuuuaguucuaaauacauccauuucugcgacgaguaauuugaaacggagggagua
(((((((((((((.((((((((((((((((((.((((((((((.((((...........)))).)))))))))).)))))))))))))))))).)))))))))))))

Structure
             c                  U          C    ugua 
uacucccuccguu cgaauuacUUGUCGCAGG AUGGAUGUAU UAga    u
||||||||||||| |||||||||||||||||| |||||||||| ||||    u
augagggaggcaa guuuaaugagcagcgucu uaccuacaua aucu    u
             a                  u          a    ugau 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Yao et al. misname this sequence miR520 in [1]. miR1136 is unrelated to mammalian miR-520;

Genome context
6A: 4711016-4711122 [+]

Database links

Mature tae-miR1136

Accession MIMAT0005371
Description Triticum aestivum tae-miR1136 mature miRNA
Sequence 23 - UUGUCGCAGGUAUGGAUGUAUCUA - 46
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17543110
    Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
    Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
    Genome Biol (2007) 8:R96