Accession
MI0006201
Description
Triticum aestivum
tae-MIR1139 precursor miRNA
Gene family
MIPF0000810;
MIR1139
Literature search
7 open access papers mention tae-MIR1139
(12 sentences)
(12 sentences)
Sequence
1408
reads,
99
reads per million, 116 experiments
gccacaguggAGAGUAACAUACACUAGUAACAuacacauaucccuagaacuauauaacuaccuucauaguggguagcaacauaagugugguaucaugcaaagcuucauuuauuagguuauagacucauauugcauugggacaugugauguuauaguaacuagcuaaguuacucaaacuaccucucuccucgauguuacuauugaaguuacucccacu
.....(((((.(((((((.(.((.(((((((((.(((((.((((..(((((((((..((((((.......))))))........))))))).))((((((.......(((((......)))))......)))))).)))).)))))..(((..(((((((.....)))))))..)))..............))))))))).))).))))))))))))
.....(((((.(((((((.(.((.(((((((((.(((((.((((..(((((((((..((((((.......))))))........))))))).))((((((.......(((((......)))))......)))))).)))).)))))..(((..(((((((.....)))))))..)))..............))))))))).))).))))))))))))
Structure
gccac A A A C --------------------------------------------a a ----------------------------------------ua - ------aa uc
agugg GAGUAAC U CA UAGUAACAu cacau uccc ga acuauau cuaccu a
||||| ||||||| | || ||||||||| ||||| |||| || ||||||| |||||| u
ucacc cucauug a gu aucauugua gugua aggg cu uggugug gauggg a
----- - a - u gcuccucucuccaucaaacucauugaaucgaucaaugauauugua c uuacguuauacucagauauuggauuauuuacuucgaaacgua a aauacaac ug
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Yao et al. misname this sequence miR523 in [1]. miR1139 is unrelated to mammalian miR-523;
Genome context
6B: 157622002-157622218 [-]
Database links
Mature tae-miR1139
| Accession | MIMAT0005374 |
| Description | Triticum aestivum tae-miR1139 mature miRNA |
| Sequence | 11 - AGAGUAACAUACACUAGUAACA - 32 |
| Evidence |
experimental
cloned [1] |
References
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