miRBase entry: aga-mir-1175

Stem-loop aga-mir-1175


Accession
MI0006238
Description
Anopheles gambiae aga-mir-1175 precursor miRNA
Gene family
MIPF0000715; mir-1175

Literature search
4 open access papers mention aga-mir-1175
(7 sentences)

Sequence

gauauggaauaaguggaguaguggucucaucgcuuagcuucagaaaagUGAGAUUCUACUUCUCCGACUUAAuucauauc
((((((((.(((((((((.(((((..((.((((((..(....)..))))))))..))))).)))).))))).))))))))

Structure
        a     -    u     uc  a      ag u 
gauaugga uaagu ggag agugg  uc ucgcuu  c u
|||||||| ||||| |||| |||||  || ||||||  |  
cuauacuu AUUCA CCUC UCAUC  AG AGUgaa  g c
        A     G    U     UU  -      aa a 


Annotation confidence Not enough data
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Genome context
chr2R: 9129786-9129865 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from aga-mir-1175
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aga-miR-1175

Accession MIMAT0005525
Description Anopheles gambiae aga-miR-1175 mature miRNA
Sequence 49 - UGAGAUUCUACUUCUCCGACUUAA - 72
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17933784
    Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion
    "Winter F, Edaye S, Huttenhofer A, Brunel C"
    "Nucleic Acids Res (2007) 35:6953-6962