Stem-loop mmu-mir-669j

Accession

MI0006286

Symbol

MGI: Mir669j

Description

Mus musculus mmu-mir-669j precursor miRNA

Literature search

9 open access papers mention mmu-mir-669j
(12 sentences)

Sequence

51 reads, 2 reads per million, 18 experiments

agcaugcgauucaugugauguccaccaagaaugugcauguguguauaguuguguacauauucacuuuuguauaugaauaUGCAUAUACUCACAUGCAAACAuacucccacgaauggcccga
.....((.((((.((.((.((.........(((((..((((((((((.(((((((((..........))))))))).))))))))))..)))))........)))).)).)))).))....

Structure

agcau  g    a  u  u  ccaccaaga     ca          g         uauu 
     gc auuc ug ga gu         augug  uguguguaua uuguguaca    c
     || |||| || || ||         |||||  |||||||||| |||||||||     
     cg uaag ac cu ca         UACAC  AUAUACGUau aguauaugu    a
-agcc  g    c  c  -  -uACAAACG     UC          a         uuuc 

Annotation confidence Low

Genome context

chr2: 10477910-10478030 [+]

Clustered miRNAs

27 other miRNAs are < 10 kb from mmu-mir-669j

Mature mmu-miR-669j

• Accession: MIMAT0005838
• Description: Mus musculus mmu-miR-669j mature miRNA
• Sequence: 80 - UGCAUAUACUCACAUGCAAACA - 101
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17989215
   RNA sequence analysis defines Dicer's role in mouse embryonic stem cells
   "Calabrese JM, Seila AC, Yeo GW, Sharp PA"
   "Proc Natl Acad Sci U S A (2007) 104:18097-18102