miRBase entry: mmu-mir-466f-4

Stem-loop mmu-mir-466f-4


Accession
MI0006291
Symbol
MGI: Mir466f-4
Description
Mus musculus mmu-mir-466f-4 precursor miRNA
Gene family
MIPF0000208; mir-466

Literature search
28 open access papers mention mmu-mir-466f-4
(69 sentences)

Sequence

1051 reads, 63 reads per million, 69 experiments
caucugcaucugugugucuACGUGUGUGUGCAUGUGCAUGUguguguaucuguaugugagugugugcaugcaugugugugcaucuauaucugugugucuacuugugugugaaugugcauau
.....((((....))))..(((((((((((((((..((((((.(.....)..))))))..)))))))))))))))((((((((((((((..(((....)))..))))).).))))))))..

Structure
---------------------------caucugcaucugugugucu               UG      -u u 
                                              ACGUGUGUGUGCAUG  CAUGUg  g g
                                              |||||||||||||||  ||||||  | u
                                              uguacguacgugugu  guguau  c a
uauacguguaaguguguguucaucugugugucuauaucuacgugug               ga      gu u 


Annotation confidence Not enough data
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Genome context
chr13: 71107089-71107209 [+]

Database links

Mature mmu-miR-466f

Accession MIMAT0005844
Description Mus musculus mmu-miR-466f mature miRNA
Sequence 20 - ACGUGUGUGUGCAUGUGCAUGU - 41
Evidence experimental
454 [1], Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  2. PubMed ID: 17989215
    RNA sequence analysis defines Dicer's role in mouse embryonic stem cells
    "Calabrese JM, Seila AC, Yeo GW, Sharp PA"
    "Proc Natl Acad Sci U S A (2007) 104:18097-18102