miRBase entry: hsa-mir-1289-1

Stem-loop hsa-mir-1289-1


Accession
MI0006350
Symbol
HGNC: MIR1289-1
Description
Homo sapiens hsa-mir-1289-1 precursor miRNA
Gene family
MIPF0000626; mir-1289

Literature search
1 open access papers mention hsa-mir-1289-1
(1 sentences)

Sequence

37 reads, 9 reads per million, 24 experiments
uucucaauuuuuaguaggaauuaaaaacaaaacugguaaaugcagacucuugguuuccacccccagagaaucccuaaaccgggggUGGAGUCCAGGAAUCUGCAUUUUagaaaguacccagggugauucugauaauugggaaca
(((((((((.......(((((((........(((...(((((((((.((((((.((((((((((................)))))))))).)))))).))))))))).....)))........)))))))...)))))))))..

Structure
--         uuuagua       aaaacaaa   --ggu         c      u          agagaau 
  uucucaauu       ggaauua        acu     aaaugcaga ucuugg uuccaccccc       c
  |||||||||       |||||||        |||     ||||||||| |||||| ||||||||||        
  aaggguuaa       ucuuagu        uga     UUUACGUCU AGGACC GAGGUggggg       c
ac         ----uag       gggaccca   aagaU         A      U          ccaaauc 


Annotation confidence Not enough data
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Genome context
chr20: 35453954-35454097 [-]

Database links

Mature hsa-miR-1289

Accession MIMAT0005879
Description Homo sapiens hsa-miR-1289 mature miRNA
Sequence 86 - UGGAGUCCAGGAAUCUGCAUUUU - 108
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621