miRBase entry: hsa-mir-548f-1

Stem-loop hsa-mir-548f-1


Accession
MI0006374
Symbol
HGNC: MIR548F1
Description
Homo sapiens hsa-mir-548f-1 precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
46 open access papers mention hsa-mir-548f-1
(146 sentences)

Sequence

794 reads, 38 reads per million, 58 experiments
auuagguuggUGCAAAAGUAAUCACAGUUUUUgacauuacuuucaaagacAAAAACUGUAAUUACUUUUggaccaaccuaauag
(((((((((((.((((((((((.((((((((((................)))))))))).)))))))))).)))))))))))..

Structure
--           G          C          acauuac 
  auuagguuggU CAAAAGUAAU ACAGUUUUUg       u
  ||||||||||| |||||||||| ||||||||||        
  uaauccaacca gUUUUCAUUA UGUCAAAAAc       u
ga           g          A          agaaacu 


Annotation confidence Not enough data
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Genome context
chr10: 54607874-54607957 [-]

Disease association
hsa-mir-548f-1 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-548f-3p

Accession MIMAT0005895
Description Homo sapiens hsa-miR-548f-3p mature miRNA
Sequence 51 - AAAAACUGUAAUUACUUUU - 69
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature hsa-miR-548f-5p

Accession MIMAT0026739
Description Homo sapiens hsa-miR-548f-5p mature miRNA
Sequence 11 - UGCAAAAGUAAUCACAGUUUUU - 32
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45