miRBase entry: hsa-mir-548o

Stem-loop hsa-mir-548o


Accession
MI0006402
Symbol
HGNC: MIR548O
Description
Homo sapiens hsa-mir-548o precursor miRNA

Literature search
42 open access papers mention hsa-mir-548o
(143 sentences)

Sequence

1679 reads, 47 reads per million, 66 experiments
uggugaaaauguguugauuguaaugguuccuauucugaucaauaaacaugguuugagccuaguuacaaugaucuaaaauucacgguCCAAAACUGCAGUUACUUUUGCaccaac
(((((.(((.(((.(((((((((((((((..(((.((.........)).)))..)))))..))))))))((........)).((((.....))))))..))).))).)))))..

Structure
--     a   u   -u  auuguaaugguuccuauucugaucaauaaacaugguuugagccuaguuacaaugaucuaaaauuca    C 
  uggug aaa gug  ug                                                                  cggu C
  ||||| ||| |||  ||                                                                  |||| A
  accaC UUU CAU  AC                                                                  GUCA A
ca     G   U   UG  ------------------------------------------------------------------    A 


Annotation confidence Not enough data
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Genome context
chr7: 102405742-102405855 [-]

Disease association
hsa-mir-548o is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-548o-3p

Accession MIMAT0005919
Description Homo sapiens hsa-miR-548o-3p mature miRNA
Sequence 87 - CCAAAACUGCAGUUACUUUUGC - 108
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621