miRBase entry: hsa-mir-548h-1

Stem-loop hsa-mir-548h-1


Accession
MI0006411
Symbol
HGNC: MIR548H1
Description
Homo sapiens hsa-mir-548h-1 precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
44 open access papers mention hsa-mir-548h-1
(148 sentences)

Sequence

1774 reads, 50 reads per million, 41 experiments
ucuguccauuaggugggugcAAAAGUAAUCGCGGUUUUUGUCauuacuuuuaaugguaaaaacuggaauuacuuuugcacugaccuaauauuaagccagaua
((((.(.(((((((.((((((((((((((..(((((((((((((((....)))))))))))))))..)))))))))))))).))))))).....).))))..

Structure
--    u ----c       g              CG               c 
  ucug c     auuaggu ggugcAAAAGUAAU  CGGUUUUUGUCauua u
  |||| |     ||||||| ||||||||||||||  |||||||||||||||  
  agac g     uaaucca ucacguuuucauua  gucaaaaaugguaau u
au    c aauua       g              ag               u 


Annotation confidence Not enough data
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Genome context
chr14: 64095024-64095125 [-]

Database links

Mature hsa-miR-548h-5p

Accession MIMAT0005928
Description Homo sapiens hsa-miR-548h-5p mature miRNA
Sequence 21 - AAAAGUAAUCGCGGUUUUUGUC - 42
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621