miRBase entry: hsa-mir-548h-3

Stem-loop hsa-mir-548h-3


Accession
MI0006413
Symbol
HGNC: MIR548H3
Description
Homo sapiens hsa-mir-548h-3 precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
43 open access papers mention hsa-mir-548h-3
(147 sentences)

Sequence

3410 reads, 130 reads per million, 74 experiments
ucugauucugcauguauuagguuggugcAAAAGUAAUCGCGGUUUUUGUCauugaaaguaauagcaaaaacugcaauuacuuuugcaccaaccuaaaaguagucacugucuucagaua
(((((..((((.....(((((((((((((((((((((.(((((((((((.((((....)))).))))))))))).)))))))))))))))))))))..)))).........)))))..

Structure
--     -------uu    augua                     C           C    a 
  ucuga         cugc     uuagguuggugcAAAAGUAAU GCGGUUUUUGU auug a
  |||||         ||||     ||||||||||||||||||||| ||||||||||| ||||  
  agacu         gaug     aauccaaccacguuuucauua cgucaaaaacg uaau a
au     ucugucacu    ---aa                     a           a    g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr17: 13543529-13543646 [-]

Database links

Mature hsa-miR-548h-5p

Accession MIMAT0005928
Description Homo sapiens hsa-miR-548h-5p mature miRNA
Sequence 29 - AAAAGUAAUCGCGGUUUUUGUC - 50
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621