miRBase entry: hsa-mir-548h-4

Stem-loop hsa-mir-548h-4


Accession
MI0006414
Symbol
HGNC: MIR548H4
Description
Homo sapiens hsa-mir-548h-4 precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
43 open access papers mention hsa-mir-548h-4
(147 sentences)

Sequence

3919 reads, 118 reads per million, 110 experiments
gcuauuagguuggugcAAAAGUAAUCGCGGUUUUUGUCauuacuuuaauuacuuuacguuucauuaaugaCAAAAACCGCAAUUACUUUUGCAccaaccuaauacuugcua
(((((((((((((((((((((((((.((((((((((((((((....(((........)))....)))))))))))))))).)))))))))))))))))))))))...))..

Structure
--  ---                       C                cuuu   uac 
  gc   uauuagguuggugcAAAAGUAAU GCGGUUUUUGUCauua    aau   u
  ||   ||||||||||||||||||||||| ||||||||||||||||    |||    
  cg   auaauccaaccACGUUUUCAUUA CGCCAAAAACaguaau    uug   u
au  uuc                       A                uacu   cau 


Annotation confidence High
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Genome context
chr8: 27048853-27048963 [-]

Database links

Mature hsa-miR-548h-5p

Accession MIMAT0005928
Description Homo sapiens hsa-miR-548h-5p mature miRNA
Sequence 17 - AAAAGUAAUCGCGGUUUUUGUC - 38
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature hsa-miR-548h-3p

Accession MIMAT0022723
Description Homo sapiens hsa-miR-548h-3p mature miRNA
Sequence 71 - CAAAAACCGCAAUUACUUUUGCA - 93
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621