miRBase entry: hsa-mir-548i-2

Stem-loop hsa-mir-548i-2


Accession
MI0006422
Symbol
HGNC: MIR548I2
Description
Homo sapiens hsa-mir-548i-2 precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
42 open access papers mention hsa-mir-548i-2
(143 sentences)

Sequence

201 reads, 39 reads per million, 52 experiments
uagauggcuccgaaguuugcauccuauuaguuuggugcAAAAGUAAUUGCGGAUUUUGCCauuaaaaguaauggcaaaaauagcaauuauuuuuguaccagccuaguaucuuuucuccuucuaacaaaguucgucccugauccaucuca
.((((((.((((((.((((.....((((((.(((((((((((((((((((...(((((((((((....)))))))))))...))))))))))))))))))).))))))................)))).)))).....)).))))))..

Structure
-u      c  -----    g    -----------caucc      u                   GGA           a 
  agaugg uc     cgaa uuug                uauuag uuggugcAAAAGUAAUUGC   UUUUGCCauua a
  |||||| ||     |||| ||||                |||||| |||||||||||||||||||   |||||||||||  
  ucuacc ag     gcuu aaac                augauc gaccauguuuuuauuaacg   aaaacgguaau a
ac      u  ucccu    g    aaucuuccucuuuucu      c                   aua           g 


Annotation confidence Not enough data
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Genome context
chr4: 9556168-9556316 [-]

Disease association
hsa-mir-548i-2 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-548i

Accession MIMAT0005935
Description Homo sapiens hsa-miR-548i mature miRNA
Sequence 39 - AAAAGUAAUUGCGGAUUUUGCC - 60
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621