Stem-loop bna-MIR164a

Accession

MI0006478

Description

Brassica napus bna-MIR164a precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

9 open access papers mention bna-MIR164a
(15 sentences)

Sequence

ccacguUGGAGAAGCAGGGCACGUGCAaaccaacaaacacgagaucuaucucauguaauuugcacgugcuccacuccuccaacaug
....(((((((.((..(((((((((((((.......(((.((((....)))).)))..)))))))))))))..)).)))))))...

Structure

ccac       A  CA             ccaacaa   c    u 
    guUGGAG AG  GGGCACGUGCAaa       aca gaga c
    ||||||| ||  |||||||||||||       ||| ||||  
    caaccuc uc  cucgugcacguuu       ugu cucu u
-gua       c  ac             -----aa   a    a 

Annotation confidence Not enough data

Genome context

EM:CW984396: 577-662 [-]

Mature bna-miR164a

• Accession: MIMAT0005633
• Description: Brassica napus bna-miR164a mature miRNA
• Sequence: 7 - UGGAGAAGCAGGGCACGUGCA - 27
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856


2. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823