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Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes |
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|---|---|
| PubMed ID | 22138974 |
| Authors | "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ" |
| Journal | "Plant Physiol |
| Volume | 158 |
| Pages | 813-823 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| bna-MIR397b | MI0006446 | None | EM:AC189186 | 82670 | 82765 | - | - |
| bna-MIR390b | MI0006448 | None | EM:AC189543 | 93838 | 93942 | + | - |
| bna-MIR171b | MI0006451 | None | EM:DX044654 | 119 | 219 | + | - |
| bna-MIR171e | MI0006454 | None | EM:AC189214 | 74569 | 74660 | - | - |
| bna-MIR171f | MI0006455 | None | EM:AC189627 | 79418 | 79536 | + | - |
| bna-MIR169b | MI0006458 | None | EM:AC189369 | 1537 | 1724 | - | - |
| bna-MIR169k | MI0006467 | None | EM:AC189356 | 6626 | 6780 | - | - |
| bna-MIR168a | MI0006470 | None | EM:AC189658 | 41467 | 41599 | - | - |
| bna-MIR167c | MI0006473 | None | EM:AC189327 | 100866 | 100999 | + | - |
| bna-MIR166c | MI0006476 | None | EM:AC189591 | 82389 | 82516 | + | - |
| bna-MIR166d | MI0006477 | None | EM:AC189313 | 1397 | 1524 | + | - |
| bna-MIR164a | MI0006478 | None | EM:CW984396 | 577 | 662 | - | - |
| bna-MIR159 | MI0006480 | None | EM:AC189598 | 83537 | 83719 | - | - |
| bna-MIR1140 | MI0006482 | None | EM:AC189528 | 128989 | 129138 | + | - |
| bna-MIR2111a | MI0011288 | None | EM:AC189208 | 23557 | 23707 | + | - |
| bna-MIR156d | MI0020260 | None | None | None | - | ||
| bna-MIR156e | MI0020261 | None | EM:AC189375 | 124714 | 124832 | + | - |
| bna-MIR156f | MI0020262 | None | EM:CV432746 | 228 | 337 | + | - |
| bna-MIR156g | MI0020263 | None | None | None | - | ||
| bna-MIR160a | MI0020264 | None | EM:AC189270 | 107472 | 107590 | + | - |
| bna-MIR160b | MI0020265 | None | EM:AC189245 | 14506 | 14593 | - | - |
| bna-MIR160c | MI0020266 | None | EM:AC189471 | 747 | 861 | + | - |
| bna-MIR160d | MI0020267 | None | EM:AC183492 | 98296 | 98384 | + | - |
| bna-MIR162a | MI0020268 | None | EM:AC189332 | 84098 | 84211 | - | - |
| bna-MIR164b | MI0020269 | None | EM:AC189579 | 62367 | 62476 | + | - |
| bna-MIR164c | MI0020270 | None | EM:AC189626 | 18955 | 19045 | + | - |
| bna-MIR164d | MI0020271 | None | EM:AC189657 | 106780 | 106889 | + | - |
| bna-MIR166f | MI0020272 | None | EM:BH938609 | 442 | 570 | + | - |
| bna-MIR166e | MI0020273 | None | None | None | - | ||
| bna-MIR167d | MI0020274 | None | EM:DY023882 | 199 | 288 | + | - |
| bna-MIR168b | MI0020275 | None | EM:EV007136 | 150 | 279 | + | - |
| bna-MIR169n | MI0020276 | None | None | None | - | ||
| bna-MIR172d | MI0020277 | None | EM:AC189487 | 133692 | 133804 | + | - |
| bna-MIR172b | MI0020278 | None | EM:AC189648 | 23979 | 24073 | - | - |
| bna-MIR172c | MI0020279 | None | EM:AC189559 | 3489 | 3626 | + | - |
| bna-MIR172a | MI0020280 | None | EM:AC189388 | 19381 | 19490 | - | - |
| bna-MIR394a | MI0020281 | None | EM:AC189318 | 31776 | 31891 | + | - |
| bna-MIR394b | MI0020282 | None | EM:AC189295 | 85927 | 86038 | + | - |
| bna-MIR395a | MI0020283 | None | EM:AC189385 | 84299 | 84381 | - | - |
| bna-MIR395b | MI0020284 | None | EM:BZ089005 | 379 | 467 | - | - |
| bna-MIR395c | MI0020285 | None | EM:DU121509 | 559 | 656 | - | - |
| bna-MIR395d | MI0020286 | None | EM:AC189385 | 85486 | 85602 | + | - |
| bna-MIR395e | MI0020287 | None | None | None | - | ||
| bna-MIR395f | MI0020288 | None | EM:BH944178 | 47 | 154 | + | - |
| bna-MIR399b | MI0020289 | None | EM:AC189240 | 96538 | 96644 | + | - |
| bna-MIR399c | MI0020290 | None | EM:BH538972 | 179 | 281 | + | - |
| bna-MIR403 | MI0020291 | None | EM:AC189416 | 25604 | 25714 | + | - |
| bna-MIR860 | MI0020292 | None | EM:CA991770 | 133 | 247 | + | - |
| bna-MIR2111d | MI0020293 | None | EM:AC189646 | 4110 | 4221 | + | - |
| bna-MIR2111c | MI0020294 | None | EM:BH979745 | 325 | 460 | - | - |
| bna-MIR6028 | MI0020295 | None | None | None | - | ||
| bna-MIR6029 | MI0020296 | None | EM:AC189547 | 50957 | 51072 | - | - |
| bna-MIR6030 | MI0020297 | None | EM:AC189357 | 62324 | 62436 | - | - |
| bna-MIR6031 | MI0020298 | None | EM:AC189275 | 4339 | 4409 | - | - |
| bna-MIR6032 | MI0020299 | None | EM:AC189188 | 93338 | 93437 | + | - |
| bna-MIR6033 | MI0020300 | None | EM:AC137927 | 57666 | 57775 | + | - |
| bna-MIR6034 | MI0020301 | None | EM:BH421046 | 416 | 542 | - | - |
| bna-MIR6035 | MI0020302 | None | EM:AC189440 | 135610 | 135700 | + | - |
| bna-MIR6036 | MI0020303 | None | EM:AC189214 | 37840 | 37994 | - | - |