Stem-loop bna-MIR6036

Accession

MI0020303

Description

Brassica napus bna-MIR6036 precursor miRNA

Literature search

2 open access papers mention bna-MIR6036
(2 sentences)

Sequence

ucaguuagccucagugguuucucgggucuaguauauauauuuuauuuuauaugguaacgggcgguuguuguggaagugauguuuaaaauaagaauucacaaugaugauugguauacuaaauAUAGUACUAGUACUUGCAUGAUCAuguauaugca
.......((....((((((...((((((((((((.((((((..........(((((((.((..(((((((((((....................)))))))))))..)).)).)))))))))))))))))).)))))...))))))......)).

Structure

ucaguua  --cuca      ucu     -       a      uuauuuuaua     -  g  cg           agugauguu 
       gc      gugguu   cgggu cuaguau uauauu          uggua ac gg  guuguugugga         u
       ||      ||||||   ||||| ||||||| ||||||          ||||| || ||  |||||||||||          
       cg      uACUAG   GUUCA GAUCAUG AUAuaa          aucau ug uu  uaguaacacuu         a
------a  uauaug      UAC     U       -      ----------     a  g  ag           aagaauaaa 

Annotation confidence Not enough data

Genome context

EM:AC189214: 37840-37994 [-]

Mature bna-miR6036

• Accession: MIMAT0023656
• Description: Brassica napus bna-miR6036 mature miRNA
• Sequence: 122 - AUAGUACUAGUACUUGCAUGAUCA - 145
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823