Stem-loop bna-MIR860

Accession

MI0020292

Description

Brassica napus bna-MIR860 precursor miRNA

Literature search

2 open access papers mention bna-MIR860
(4 sentences)

Sequence

uggucaaguguaauguauguaguccaaucuauugaaguacuagcacaccaucucuagugagaugaugugguugaguaguUCAAUACAUUGGACUACAUAUauuacuuuugaucaa
((((((((.(((((((((((((((((((.(((((((.((((..((((.((((((....)))))).))))....)))).))))))).))))))))))))))))))).)))))))).

Structure

-        u                   c       g    --ag    c      u 
 uggucaag guaauguauguaguccaau uauugaa uacu    caca caucuc a
 |||||||| ||||||||||||||||||| ||||||| ||||    |||| ||||||  
 acuaguuu cauuaUAUACAUCAGGUUA AUAACUu auga    gugu guagag g
a        u                   C       g    guug    a      u 

Annotation confidence Low

Genome context

EM:CA991770: 133-247 [+]

Mature bna-miR860

• Accession: MIMAT0023645
• Description: Brassica napus bna-miR860 mature miRNA
• Sequence: 80 - UCAAUACAUUGGACUACAUAU - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823