Stem-loop bna-MIR6030

Accession

MI0020297

Description

Brassica napus bna-MIR6030 precursor miRNA

Literature search

1 open access papers mention bna-MIR6030
(1 sentences)

Sequence

ucagggauuaagugucuguaugugugggcugaguaggcacaaucacagcuuuuacucagaucugguugugaauggaccuucUCCACCCAUACCAUACAGACCCuuaauccuga
(((((.((((((.(((((((((((((((..(((.(((..((.((((((((.............)))))))).))..))).)))..)))))).))))))))).)))))))))))

Structure

     g      u         -      cu   u   ca  a        uuuac 
ucagg auuaag gucuguaug uguggg  gag agg  ca ucacagcu     u
||||| |||||| ||||||||| ||||||  ||| |||  || ||||||||     c
agucc uaauuC CAGACAUAC AUACCC  CUc ucc  gu aguguugg     a
     -      C         C      AC   u   ag  a        ucuag 

Annotation confidence Not enough data

Genome context

EM:AC189357: 62324-62436 [-]

Mature bna-miR6030

• Accession: MIMAT0023650
• Description: Brassica napus bna-miR6030 mature miRNA
• Sequence: 82 - UCCACCCAUACCAUACAGACCC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823