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miRBase |
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Stem-loop sequence vvi-MIR172c |
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Accession | MI0006546 (change log) | ||||
Description | Vitis vinifera miR172c stem-loop | ||||
Gene family | MIPF0000035; MIR172 | ||||
Literature search |
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10 open access papers mention vvi-MIR172c | ||||
Stem-loop |
--gu g a g a a auu cu gug ug -gu u u u 5' uugc g ug agcaucaucaagauuc ca gu gaga ca cg gug ga gg gacu u |||| | || |||||||||||||||| || || |||| || || ||| || || |||| u 3' aacg c ac ucguaguaguucuaag gu ua uucu gu gc cac cu cc cugg g aaau g g g g g -gu cg --a cu auc u - u |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
Mature sequence vvi-miR172c |
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Accession | MIMAT0005701 |
Sequence |
108 - ggaaucuugaugaugcugcag - 128 |
Deep sequencing | 1850 reads, 2 experiments |
Evidence | experimental; Array [2] |
References |
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1 |
PMID:17721507
"The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla"
Nature. 449:463-467(2007).
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2 |