Stem-loop osa-MIR1435

Accession

MI0007021

Description

Oryza sativa osa-MIR1435 precursor miRNA

Gene family

MIPF0000760; MIR1435

Literature search

3 open access papers mention osa-MIR1435
(4 sentences)

Sequence

acuUUUCUUAAGUCAAACUUUUUuuuagauuugaucaaauuuauaaaaaaaauauagcaauauuuuuagaaaaaaauauguucaauauuaaauguaaugaaacuaauuuggugcuauaacuguuuuuauauuuuucuauaauaaauuugauuaaacuuugaaguaguuugacuuaaaaaaagu
((((((.((((((((((((.((((..((.(((((((((((((((...((((((((((.((((.((.(((....((((...((((.(((.....))).))))....))))....))).)).)))).)))))))))).....)))))))))))))))))..)))).)))))))))))).))))))

Structure

      C            U    uu  a               --aaa          c    u  u   aaaa    -aug    a   u 
acuUUU UUAAGUCAAACU UUUu  ag uuugaucaaauuuau     aaaaauauag aaua uu uag    aaau    uuca uau a
|||||| |||||||||||| ||||  || |||||||||||||||     |||||||||| |||| || |||    ||||    |||| ||| a
ugaaaa aauucaguuuga gaag  uc aaauuaguuuaaaua     uuuuuauauu uugu aa auc    uuua    aagu aug a
      a            u    uu  -               auauc          u    c  u   gugg    auca    a   u 

Annotation confidence Not enough data

Genome context

Chr1: 29289280-29289462 [-]

Mature osa-miR1435

• Accession: MIMAT0005986
• Description: Oryza sativa osa-miR1435 mature miRNA
• Sequence: 4 - UUUCUUAAGUCAAACUUUUU - 23
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18312648
   Identification of novel and candidate miRNAs in rice by high throughput sequencing
   Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK
   BMC Plant Biol (2008) 8:25