Stem-loop osa-MIR1441

Accession

MI0007029

Description

Oryza sativa osa-MIR1441 precursor miRNA

Literature search

4 open access papers mention osa-MIR1441
(6 sentences)

Sequence

261 reads, 181 reads per million, 2 experiments

guuuuuucauucguguccgaaaacuccuuuugauaucuggucaaacauucgaugugacaucuaaaaauuuucuuuucgcgaacuaagggccuguuuaguucgcgaaaagaaaauuuuugggugucacaucggacguuuaACCGGAUGUCGGAAAAGGUUUucagacacgaauaaaaaaac
(((((((.(((((((((.(((((((..((((((((((((((.((((.((((((((((((((((((((((((((((((((((((((((......)))))))))))))))))))))))))))))))))))))))).)))).))))))))))))))..))))))).))))))))).)))))))

Structure

       c         c       cc              c    a                                        gg 
guuuuuu auucguguc gaaaacu  uuuugauaucuggu aaac uucgaugugacaucuaaaaauuuucuuuucgcgaacuaag  c
||||||| ||||||||| |||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||   
caaaaaa uaagcacag cuUUUGG  AAGGCUGUAGGCCA uuug aggcuacacuguggguuuuuaaaagaaaagcgcuugauuu  c
       a         a       AA              a    c                                        gu 

Annotation confidence Low

Genome context

Chr12: 19485741-19485920 [-]

Mature osa-miR1441

• Accession: MIMAT0005991
• Description: Oryza sativa osa-miR1441 mature miRNA
• Sequence: 140 - ACCGGAUGUCGGAAAAGGUUU - 160
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18312648
   Identification of novel and candidate miRNAs in rice by high throughput sequencing
   Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK
   BMC Plant Biol (2008) 8:25