Stem-loop sequence ptc-MIR1449

Accession

MI0007049 (change log)

Description

Populus trichocarpa miR1449 stem-loop

Stem-loop

            ag     c   ag  -a    -ga   -uaa      aaaacaaacag a 
5' gauuaguug  gugca gua  au  acuc   ugu    uuuaaa           g u
   |||||||||  ||||| |||  ||  ||||   |||    ||||||           |  
3' cuaauuaau  uacgu cgu  ua  uggg   aca    aaauuu           c c
            --     u   ga  aa    aag   uaaa      aaauaaaauaa u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Poptr2_0; GCA_000002775.2): CM000338.2: 22334008-22334122 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0007049

Mature sequence ptc-miR1449

• Accession: MIMAT0006011
• Sequence: 8 - ugaggugcacguaagauaacuc - 29
• Evidence: experimental; cloned [1]

References

1. PMID:18363789 "Stress-responsive microRNAs in Populus" Lu S, Sun YH, Chiang VL Plant J. 55:131-151(2008).