miRBase entry: gga-mir-1306

Stem-loop gga-mir-1306


Accession
MI0007057
Description
Gallus gallus gga-mir-1306 precursor miRNA
Gene family
MIPF0000531; mir-1306

Literature search
4 open access papers mention gga-mir-1306
(8 sentences)

Sequence

948 reads, 13 reads per million, 5 experiments
uccACCACCUCCCCUGCAAACGUCCAGUgacgcagagguaaUGGACGUUGGCUCUGGUGGUGAUggaca
((((.((((.((...((.((((((((...((......))..)))))))).))...)).)))).))))..

Structure
--    C    U  CCU  A        GUg  gc 
  uccA CACC CC   GC AACGUCCA   ac  a
  |||| |||| ||   || ||||||||   ||   
  aggU GUGG GG   CG UUGCAGGU   ug  g
ac    A    U  UCU  G        -aa  ga 


Annotation confidence High
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Genome context
chr15: 1294136-1294204 [+]

Database links

Mature gga-miR-1306-3p

Accession MIMAT0007329
Description Gallus gallus gga-miR-1306-3p mature miRNA
Sequence 42 - UGGACGUUGGCUCUGGUGGUGAU - 64
Evidence experimental
Illumina [1]

Mature gga-miR-1306-5p

Accession MIMAT0026763
Description Gallus gallus gga-miR-1306-5p mature miRNA
Sequence 4 - ACCACCUCCCCUGCAAACGUCCAGU - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18430245
    Deep sequencing of chicken microRNAs
    Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
    BMC Genomics (2008) 9:185

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45