Stem-loop odi-mir-1476

Accession

MI0007087

Description

Oikopleura dioica odi-mir-1476 precursor miRNA

Sequence

agccgagaaaucuuuUCUGGGCAAAGGUAAAUGUAUGcguaagcaucacuuacccacaucuUACAUGUACCGUUGCUCAGAGAcggucucgcgcuaucaucg
((((((((..((.(((((((((((.((((.(((((((.(((((.....))))).)).....))))).)))).))))))))))).))))))).))).......

Structure

-------   -     aa  u           A    A     -----  c     c 
       agc cgaga  uc uuUCUGGGCAA GGUA AUGUA     UG guaag a
       ||| |||||  || ||||||||||| |||| |||||     || ||||| u
       ucg gcucu  gg AGAGACUCGUU CCAU UACAU     ac cauuc c
gcuacua   c     --  c           G    G     ucuac  c     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1476-5p

• Accession: MIMAT0006027
• Description: Oikopleura dioica odi-miR-1476-5p mature miRNA
• Sequence: 16 - UCUGGGCAAAGGUAAAUGUAUG - 37
• Evidence: experimental ; cloned [1]

Mature odi-miR-1476-3p

• Accession: MIMAT0006028
• Description: Oikopleura dioica odi-miR-1476-3p mature miRNA
• Sequence: 62 - UACAUGUACCGUUGCUCAGAGA - 83
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080