Stem-loop odi-mir-1490b

Accession

MI0007102

Description

Oikopleura dioica odi-mir-1490b precursor miRNA

Gene family

MIPF0000525; mir-1490

Sequence

cgccggucuuucgcgAGGCAGUGAGUUGAUAGCGCCCUGUagaguggguuuagaacuaaacgaggccuauccuuacucgccacaacgaagcgcugacuguuc
...((((.(((((...(((((((((..(((((.(((.(((..(((.........)))..))).)))))))))))))).)))....))))).)))).......

Structure

----cgc    c     -cgA   -      UU     C   C   ag   ggg 
       cggu uuucg    GGC AGUGAG  GAUAG GCC UGU  agu   u
       |||| |||||    ||| ||||||  ||||| ||| |||  |||   u
       gucg gaagc    ccg ucauuc  cuauc cgg gca  uca   u
cuuguca    c     aaca   c      --     -   a   aa   aga 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1490b

• Accession: MIMAT0006043
• Description: Oikopleura dioica odi-miR-1490b mature miRNA
• Sequence: 16 - AGGCAGUGAGUUGAUAGCGCCCUGU - 40
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080