Stem-loop odi-let-7b

Accession

MI0007137

Description

Oikopleura dioica odi-let-7b precursor miRNA

Sequence

ucggcuuggugucguUGAGGUAGUGGUUGUAAUAGCUcaagaauauacccucccgagcgcuauuccacaaucuacuucuccaucaccgauccacagucgaca
(((((((((.((((.(((((.(((((((((((((((((..((........))..))..))))))..)))).)))))...)).))).))))))).))))))..

Structure

--      -   u    u   -  --U     -    --      --  aa  aua 
  ucggcu ugg gucg UGA GG   AGUGG UUGU  AAUAGC  Uc  ga   u
  |||||| ||| |||| ||| ||   ||||| ||||  ||||||  ||  ||    
  agcuga acc uagc acu cc   ucauc aaca  uuaucg  ag  cu   a
ac      c   -    c   a  ucu     u    cc      cg  cc  ccc 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-let-7b

• Accession: MIMAT0006075
• Description: Oikopleura dioica odi-let-7b mature miRNA
• Sequence: 16 - UGAGGUAGUGGUUGUAAUAGCU - 37
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080